BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015G08SP1|AL426905
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig768 1637 0.0
3x_Contig1770 210 3e-54
>3x_Contig768
Length = 2062
Score = 1637 bits (825), Expect = 0.0
Identities = 828/829 (99%)
Strand = Plus / Plus
Query: 1 acttgttcatacgtttcatattcttatcagcacggaacatgctgatcttgttgtctgggg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 acttgttcatacgttccatattcttatcagcacggaacatgctgatcttgttgtctgggg 1130
Query: 61 ttctgtacgccttcaaaccttcgaacaattcgaaagcatagtggaacacacacgaggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 ttctgtacgccttcaaaccttcgaacaattcgaaagcatagtggaacacacacgaggatg 1190
Query: 121 gatctaacgacaagttcccgtatggtttaatctctgggacaccccaaccgttttcagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 gatctaacgacaagttcccgtatggtttaatctctgggacaccccaaccgttttcagctg 1250
Query: 181 tccattcgatggttaacatatggtcagtgaaagtttgaccgaaaaccaactcatcgtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 tccattcgatggttaacatatggtcagtgaaagtttgaccgaaaaccaactcatcgtttg 1310
Query: 241 gacgtggcttcgatggggtttcgaccttggtgattttaaccttggatgcgtctaaggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 gacgtggcttcgatggggtttcgaccttggtgattttaaccttggatgcgtctaaggaca 1370
Query: 301 tggctctataacttgttaaaatatgactcttaatacctcttgatggaatggaaactctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 tggctctataacttgttaaaatatgactcttaatacctcttgatggaatggaaactctgc 1430
Query: 361 tggaaacagctcttgcacaattccgtagtccaatgtagttcatgaatgttccttgccagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 tggaaacagctcttgcacaattccgtagtccaatgtagttcatgaatgttccttgccagg 1490
Query: 421 gatgaaatagctaggacaaatgatacagatggtgacaataacgggccaaacaagaacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 gatgaaatagctaggacaaatgatacagatggtgacaataacgggccaaacaagaacaga 1550
Query: 481 aacaagacaaatgcccttcttatctgcctcttatatacatgtcatcagttggttgaaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 aacaagacaaatgcccttcttatctgcctcttatatacatgtcatcagttggttgaaact 1610
Query: 541 tttttttttcacctcagtctatgcgtattatcgaaaaatggtctcgagagacaggaacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 tttttttttcacctcagtctatgcgtattatcgaaaaatggtctcgagagacaggaacca 1670
Query: 601 ggcatcccacctgttgccgagggcagattgccggttgcatttcctacaagccggtattct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 ggcatcccacctgttgccgagggcagattgccggttgcatttcctacaagccggtattct 1730
Query: 661 gttgcttagtgtttccagtgattgactcacaagtttcaattccacttgtacttggttcag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 gttgcttagtgtttccagtgattgactcacaagtttcaattccacttgtacttggttcag 1790
Query: 721 actttgcttcggtaatcttcgctcaggttcgctgcacatgcatgactcaccaagatagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1791 actttgcttcggtaatcttcgctcaggttcgctgcacatgcatgactcaccaagatagtg 1850
Query: 781 cgatgatctctcagaaacaggtattgagaacgcaggtgaaagccatgtt 829
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 cgatgatctctcagaaacaggtattgagaacgcaggtgaaagccatgtt 1899
>3x_Contig1770
Length = 29267
Score = 210 bits (106), Expect = 3e-54
Identities = 121/124 (97%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 836 cctttcgcaggctgaattggcacgccaatctgaaaattgtgtcccgtcatgcattgtcac 895
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 29267 cctttcgcaggctgaattggcacgccaatctgaaa-ttgtgtcccgtcatgcattgtcac 29209
Query: 896 ttgtcaacgccaagggtttcactcacattgcatgtttcttgaacatgga-cmtagcgaga 954
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 29208 ttgtcaacgccaagggtttcactcacattgcatgtttcttgaacatggaccatagcgaga 29149
Query: 955 tgaa 958
||||
Sbjct: 29148 tgaa 29145
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6879
Number of Sequences: 1807
Number of extensions: 6879
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)